For the most complete list of publications, see Claire Tomlin's Google Scholar page.

## Book

C. Tomlin and M. Greenstreet, Editors. Hybrid Systems: Computation and Control, Springer-Verlag Lecture Notes in Computer Science (LNCS 2289), March 2002.

## Articles in Refereed Journals

M. Chen, S. Bansal, J.F. Fisac, and C.J. Tomlin. Robust Sequential Path Planning Under Disturbances and Adversarial Intruder. IEEE Transactions on Control Systems Technology, 2018.

J. F. Fisac*, A. K. Akametalu*, J. H. Gillula, S. Kaynama, M. N. Zeilinger, and C. J. Tomlin. A General Safety Framework for Learning-Based Control in Uncertain Robotic Systems. IEEE Transactions on Automatic Control, Accepted to appear, 2018.

R. Dobbe, S. Liu, Y. Yuan, and C.J. Tomlin. Blind Identification of Fully Observed Linear Time-Varying Systems via Sparse Recovery. Under review with Automatica, 2017.

M. Chen, S. Herbert, M. S. Vashishtha, S. Bansal, and C. J. Tomlin, A General System Decomposition Method for Computing Reachable Sets and Tubes, IEEE Transactions on Automatic Control, Accepted to appear.

I. Yang, S. Burden, R. Rajagopal, S. Sastry, and C. J. Tomlin, Approximation algorithms for combinatorial dynamical systems, IEEE Transactions on Automatic Control, Accepted to appear, June 2015.

M. Schwager, M. P. Vitus, S. Powers, D. Rus, and C. J. Tomlin, Robust Adaptive Coverage Control for Robotic Sensor Networks, IEEE Transactions on Control of Network Systems, Accepted to appear, June 2015.

M. P. Vitus, Z. Zhou, and C. J. Tomlin, Stochastic Control with Uncertain Parameters via Chance Constrained Control, IEEE Transactions on Automatic Control, Accepted to appear, May 2015.

H. Huang, J. Ding, W. Zhang, and C. Tomlin, Automation-Assisted Capture-the-Flag: A Differential Game Approach, IEEE Transactions on Control Systems Technology, 23:3, pp. 1014-1028, May 2015.

Y. H. Chang, J. Korkola, D. N. Amin, M. Moasser, J. Carmena, J. W. Gray, and C. J. Tomlin, Disentangling Multidimensional Spatiotemporal Data into their Common and Aberrant Responses, PLoS ONE 10:4 e0121607, 2015.

S. Gowda, S. Overduin, M. Chen, Y. H. Chang, C. J. Tomlin, and J. Carmena, Accelerating submovement decomposition with search space reduction heuristics, IEEE Transactions on Biomedical Engineering, May 2015.

Y. H. Chang, R. Dobbe, P. Bhushan, J. W. Gray, and C. J. Tomlin, Reconstruction of Gene Regulatory Networks based on Repairing Sparse Low-rank Matrices, IEEE/ACM Transactions on Computational Biology and Bioinformatics, Accepted to appear, 2015.

Y. H. Chang, J. W. Gray, and C. J. Tomlin, Exact Reconstruction of Gene Regulatory Networks using Compressive Sensing, BMC Bioinformatics, 15:400, 2014.

M. Matis, D. A. Russler-Germain, Q. Hu, C. J. Tomlin, and J. D. Axelrod, Microtubules provide directional information for core PCP function, Elife, 2014 Aug 14;3:e02893.

P. Park, H. Khadilkar, H. Balakrishnan, C. Tomlin, High Confidence Networked Control for Next Generation Air Transportation Systems, IEEE Transactions on Automatic Control, 59:12, pp. 3357- 3372, August 2014.

A. Alam, A. Gattami, K. Johansson, and C. Tomlin, Guaranteeing safety for heavy duty vehicle platooning: Safe set computations and experimental evaluations, Journal of Control Engineering Practice 24: 33-41, 2014.

P. Park, H. Khadilkar, H. Balakrishnan, C. Tomlin, Hybrid Communication Protocols and Control Algorithms for NextGen Aircraft Arrivals, IEEE Transactions on Intelligent Transportation Systems, 15:2, pp. 615-626, April 2014.

P. Park and C. Tomlin, Performance Evaluation and Optimization of Communication Infrastructure for Next Generation Air Transportation System, Accepted to appear, IEEE Transactions on Parallel and Distributed Systems, 26(4): 1106-1116, April 2014.

L. Zhao, W. Zhang, J. Hu, A. Abate, C. Tomlin, On the Optimal Solutions of the Infinite-Horizon Linear Sensor Scheduling Problem, IEEE Transactions on Automatic control, 59:10, pp. 2825 - 2830, October 2014.

I. Yang, and C. J. Tomlin, Reaction-Diffusion Systems in Protein Networks: Global Existence and Identification, Systems and Control Letters, Volume 74, pp. 50-57, 2014.

M. Lee, A. Aswani, A. Han, C. Tomlin, and J. Dueber, Expression-level optimization of a multi- enzyme pathway in the absence of a high-throughput assay, Nucleic Acids Res. 41(22): 10668-78, Dec 2013.

K. Sachs, S. Itani, J. Fitzgerald, L. Wille, B. Schoeberl, G. Nolan, and C. J. Tomlin, Single timepoint models of dynamic systems, Journal of the Royal Society Interface Focus, 3 (4), 2013.

S. Summers, M. Kamgarpour, C. J. Tomlin, J. Lygeros, Stochastic Hybrid System Controller Synthesis for Reachability Specifications Encoded by Random Sets, Automatica, 49(9): 2906-2910, 2013.

D. M. Stipanovic, C. Valicka, C. J. Tomlin, and T. R. Bewley, Safe and Reliable Coverage Control, Numerical Algebra, Control and Optimization 3, pp. 31-48, 2013.

A. Aswani, H. Gonzales, S. Sastry, and C. J. Tomlin, Provably safe and robust learning-based model predictive control, Automatica, 49(5): 1216-1226, 2013.

J. Ding, M. Kamgarpour, S. Summers, A. Abate, J. Lygeros, and C. J. Tomlin. A Stochastic Games Framework for Verification and Control of Discrete Time Stochastic Hybrid systems, Automatica, 49(9): 2665-2674, 2013.

A. Abate*, S. Vincent*, R. Dobbe*, A. Silletti, N. Master, J. Axelrod and C. Tomlin, A Mechanical Modeling Framework for the Study of Epithelial Morphogenesis, IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 9, no. 6, pp. 1607-1620, November 2012.

A. Abate, S. Vincent, R. Dobbe, A. Silletti, N. Master, J. D. Axelrod, and C. J. Tomlin, A Mathematical Model to study the Dynamics of Epithelial Cellular Networks, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 9(6):1607-20, 2012.

A. Aswani, M.D. Biggin, P. Bickel, and C. Tomlin, Nonparametric variable selection and modeling for spatial and temporal regulatory networks, Methods Cell Biol. 110:243-261, 2012.

Y. H. Chang, J. Gray, and C. J. Tomlin, Optimization-based Inference for Temporally Evolving networks with Applications in Biology, Journal of Computational Biology. 19(12): 1307-1323, 2012.

M. Vitus. W. Zhang, A. Abate, J. Hu and C. J. Tomlin, On Efficient Sensor Scheduling for Linear Dynamical Systems, Automatica, 48:10, pp. 2482-2493, October 2012.

D. M. Stipanovic, C. J. Tomlin, and G. Leitmann, Monotone Approximations of Minimum and Maximum Functions and Multi-Objective Problems, Applied Mathematics and Optimization 66 (2012), pp. 455-473.

W. Zhang, M. Kamgarpour, D. Sun, and C. J. Tomlin, A Hierarchical Flight Planning Frame- work for Air Traffic Management, Proceedings of the IEEE, Special Issue on Cyber-Physical Systems, Volume 100, pp. 179-194, January 2012.

A. Aswani, N. Master, J. Taneja, D. Culler, and C. J. Tomlin, Reducing transient and steady state electricity consumption in HVAC using learning-based model predictive control,Proceedings of the IEEE, Special Issue on Cyber-Physical Systems, Volume 100, pp. 240-253, January 2012.

M. Kamgarpour and C. J. Tomlin, On Optimal Control of Non-Autonomous Switched Systems with a Fixed Mode Sequence, Automatica, Volume 48, No. 6, pp. 1177-1181, 2012.

J. Ding, J. Sprinkle, C. Tomlin, S. Sastry, and J. Paunicka, Reachability Calculations for Vehicle Safety during Manned/Unmanned Vehicle Interaction, AIAA Journal of Guidance, Control, and Dynamics, Volume 35, Number 1, pp. 138-152, 2012.

D. M. Stipanovic, C. J. Tomlin, and G. Leitmann, A Note on Monotone Approximations of Minimum and Maximum Functions and Multi-Objective Problems, Numerical Algebra, Control and Optimization 1, pp. 487-493, 2011.

J. Ding, J. Gillula, H. Huang, M. Vitus, W. Zhang, and C. J. Tomlin, Hybrid Systems in Robotics: Toward Reachability-based controller design, IEEE Robotics and Automation Magazine, Volume 18, No. 3, pp. 33-43, September 2011.

G. M. Hoffmann, H. Huang, S. L. Waslander, and C. J. Tomlin, Precision Flight Control for a Multi-Vehicle Quadrotor Helicopter Testbed, Journal of Control Engineering Practice, Volume 19, Issue 9, pp. 1023-1036, Elsevier, September 2011. Awarded the 2014 Control Engineering Paper Prize, IFAC, Cape Town, 2014.

A. Silletti, A. Abate, J. D. Axelrod, and C. J. Tomlin,Versatile Spectral Methods for Point Set Matching, Pattern Recognition Letters, Volume 32, Number 5, pp. 731-739, 2011.

J. D. Axelrod and C. J. Tomlin, Modeling the control of planar cell polarity, Wiley Interdisciplinary Reviews: Systems Biology and Medicine, 2011.

J. H. Gillula, G. M. Hoffmann, H. Huang, M. P. Vitus, and C. J. Tomlin, Applications of Hybrid Reachability Analysis to Robotic Aerial Vehicles, International Journal of Robotics Research, Volume 30, Number 3, pp. 335-354, March 2011.

S. Shankaran, D. M. Stipanovic, and C. J. Tomlin, Collision Avoidance Strategies for a Three Player Game, Annals of the International Society of Dynamic Games 11, pp. 253 - 271, 2011.

A. Aswani, P. Bickel, C. J. Tomlin, Regression on manifolds: estimation of the exterior derivative, Annals of Statistics, Volume 39, Number 1, pp. 48-81, 2011.

H. Huang and C. J. Tomlin, A Hybrid System Model of Air Traffic Controller Cognition, Transportation Research Record, Journal of the Transportation Research Board, December 2010.

R. Teo, D. M. Stipanovic, and C. J. Tomlin, Decentralized Spacing Control of a String of Multiple Vehicles over Lossy Datalinks, IEEE Transactions on Control Systems Technology, Volume 18, Issue 2, pp. 469 - 473, March 2010.

A. Aswani, S. Ker anen, J. Brown, C. Fowlkes, D. Knowles, M. Biggin, P. Bickel, and C. J. Tomlin, Nonparametric identification of regulatory interactions from spatial and temporal gene expression data, BMC Bioinformatics, 11:413, 2010.

G. M. Hoffmann and C. J. Tomlin, Mobile Sensor Network Control using Mutual Information Methods and Particle Filters, IEEE Transactions on Automatic Control, 55(1), pp. 32-47, January 2010.

A. Aswani, and C. J. Tomlin, Monotone Piecewise Affine Systems, IEEE Transactions on Automatic Control, 54(8), pp. 1913-1918, August 2009.

D. Ma, K. Amonlirdviman, R. L. Raffard, A. Abate, C. J. Tomlin, and J. D. Axelrod, Cell packing influences planar cell polarity signaling, Proc Natl Acad Sci U S A. 105(48):18800-5. December 2, 2008. http:www.pnas.org

*content*105*48*18800.fullS. L. Waslander, K. Roy, R. Johari, and C. J. Tomlin, Lump-Sum Markets for Air Traffic Flow Control with Competitive Airlines, Proceedings of the IEEE, Special Issue on Aviation Information Systems, December 2008.

S. L. Waslander, R. L. Raffard, and C. J. Tomlin, Market-based air traffic flow control with competing airlines, AIAA Journal of Guidance, Dynamics, and Control, 31(1), pp. 148-161, Jan-Feb 2008.

R. L. Raffard, K. Amonlirdviman, J. D. Axelrod, and C. J. Tomlin, An adjoint-based parameter identification algorithm applied to planar cell polarity signaling, Joint Special Issue of IEEE Transactions on Automatic Control and IEEE Transactions on Circuits and Systems on Systems Biology, pp. 109-121, January 2008.

H. Balakrishnan, N. Dukkipati, N. McKeown, and C. J. Tomlin, Stability Analysis of Explicit Congestion Control Protocols, IEEE Communication Letters, 11(10), October 2007.

M. K. Oishi, I. M. Mitchell, A. M. Bayen and C. J. Tomlin, Invariance-preserving abstractions of hybrid systems: Application to user interface design, IEEE Transactions on Control Systems Technology, 16(2), pp. 229-244, March 2008.

I. Hwang, J. Kim, and C. J. Tomlin, Protocol-Based Conflict Resolution for Air Traffic Control, Air Traffic Control Quarterly, 15(1), pp. 1-34, 2007.

C. J. Tomlin and J. D. Axelrod, Biology by numbers: mathematical modeling in developmental biology, Nature Reviews Genetics, 8(5), pp. 331-340, May 2007.

I. Hwang, H. Balakrishnan, K. Roy, and C. Tomlin, Multiple-Target Tracking and Identity Management Algorithm with Application to Aircraft Tracking, AIAA Journal of Guidance, Control and Dynamics, 30(3), pp. 641-653, May-June 2007.

A. M. Bayen, I. Mitchell, M. K. Oishi and C. J. Tomlin, Reachability Analysis and Optimal Control Applied to Aircraft Autoland Systems, AIAA Journal on Guidance, Control and Dynamics, 30(1), pp. 68-77, January-February 2007.

J. Hu, M. Prandini, and C. Tomlin, Conjugate points in formation constrained optimal multi-agent coordination: a case study, SIAM J. Control and Optimization, vol. 45, no. 6, pp. 2119-2137, 2007.

A. M. Bayen, R. Raffard, and C. J. Tomlin, Adjoint-based control of a new Eulerian network model of Air Traffic Flow, IEEE Transactions on Control Systems Technology, 14(5): 804-818, September 2006.

I. Hwang, H. Balakrishnan, and C. J. Tomlin, State Estimation for Hybrid Systems: Applications to Aircraft Tracking, IEE Proceedings of Control Theory and Applications, 153(5): 556-566, September 2006.

A. M. Bayen, P. Grieder, G. Meyer, and C. J. Tomlin, Lagrangian Delay Predictive Model for Sector-Based Air Traffic Flow, In the AIAA Journal of Guidance, Control, and Dynamics, 28(5): 1015?1026, September-October 2005.

I. Mitchell, A. Bayen, and C. J. Tomlin, Computing Reachable Sets for Continuous Dynamic Games using Level Set Methods, IEEE Transactions on Automatic Control, 50(7): 947-957, July 2005.

D. M. Stipanovic, S. Shankaran, and C. J. Tomlin, Multi-agent avoidance control using an M-Matrix property, Electronic Journal of Linear Algebra (ELA), 12: 64-72, May 2005.

C. J. Tomlin and J. D. Axelrod, Understanding biology by reverse engineering the control, Proceedings of the National Academy of Sciences (PNAS) 102(12): 4219-4220, March 2005. http:

K. Amonlirdviman, N. A. Khare, D. R. P. Tree, W.-S. Chen, J. D. Axelrod, C. J. Tomlin, Mathematical modeling of planar cell polarity to understand domineering non-autonomy, Science 307 5708:423-426, January 2005.

R. Ghosh and C. J. Tomlin, Symbolic reachable set computation of piecewise affine hybrid automata and its application to biological modeling: Delta-Notch protein signaling, IEE Systems Biology, 1(1): 170-183, June 2004.

D. M. Stipanovic, G. Inalhan, R. Teo, C. J. Tomlin, Decentralized Overlapping Control of a Formation of Unmanned Aerial Vehicles, Automatica, 40(8): 1285-1296, August 2004.

D. M. Stipanovic, I. Hwang, and C. J. Tomlin, Computation of an Overapproximation of the Backwards Reachable Set using Subsystem Level Set Functions, Dynamics of Continuous, Discrete and Impulsive Systems, Series A: Mathematical Analysis 11: 399-411, 2004.

C. J. Tomlin, I. Mitchell, A. Bayen, and M. Oishi, Computational Techniques for the Verification and Control of Hybrid Systems, Proceedings of the IEEE, 91(7): 986-1001, July 2003.

I. Mitchell and C. J. Tomlin, Approximating Reachable Sets by Hamilton-Jacobi Projections, Journal of Scientific Computing, Volume 19(1-3): 323-346, December 2003.

R. Teo and C. J. Tomlin, Computing Danger Zones for Provably Safe Closely Spaced Parallel Approaches, AIAA Journal of Guidance, Control, and Dynamics, 26(3): 434-443, May-June 2003.

C. J. Tomlin, I. Mitchell, and R. Ghosh, Safety Verification of Conflict Resolution Maneuvers, IEEE Transactions on Intelligent Transportation Systems, 2(2): 110-120, June 2001.

C. J. Tomlin, J. Lygeros, and S. Sastry, Game Theoretic Approach to Controller Design for Hybrid Systems, Proceedings of the IEEE, 88(7): 949-970, July 2000.

J. Lygeros, C. J. Tomlin, and S. Sastry, Controllers for Reachability Specifications for Hybrid Systems, Automatica, 35(3): 349-370, March 1999.

C. J. Tomlin and S. Sastry, Switching through Singularities, Systems and Control Letters, 35: 145-154, November 1998.

C. J. Tomlin, G. Pappas, and S. Sastry, Conflict Resolution for Air Traffic Management: A Case Study in Multi-Agent Hybrid Systems, IEEE Transactions on Automatic Control, 43(4): 509-521, April 1998.

C. J. Tomlin and S. Sastry, Bounded Tracking for Non-Minimum Phase Nonlinear Systems with Fast Zero Dynamics, International Journal of Control, 68(4): 819-847, November 1997.

## Articles in Refereed Conference Proceedings

D. Fridovich-Keil*, S. Herbert*, J. F. Fisac*, S. Deglurkar, and C. J. Tomlin. Planning, Fast and Slow: A Framework for Adaptive Real-Time Safe Trajectory Planning. IEEE Conference on Robotics and Automation, 2018.

R. Dobbe, S. Dean, T. Gilbert, and N. Kohli. A Broader View on Bias in Automated Decision-Making: Reflecting on Epistemology and Dynamics. Fairness, Accountability and Transparency in Machine Learning Workshop. ICML, 2018.

J.F. Fisac*, A. Bajcsy, S.L. Herbert, D. Fridovich-Keil, S. Wang, C.J. Tomlin, and A.D. Dragan. Probabilistically Safe Robot Planning with Confidence-Based Human Predictions. Robotics: Science and Systems (RSS), 2018.

D.P. Zhou and C.J. Tomlin. Budget-Constrained Multi-Armed Bandits with Multiple Plays. To appear in the proceedings of the 32nd AAAI Conference on Artificial Intelligence, 2018.

S. Herbert*, M. Chen*, S. Han, S. Bansal, J. Fisac, and C. J. Tomlin. FaSTrack: A Modular Framework for Fast and Guaranteed Safe Motion Planning. IEEE Conference on Decision and Control, 2017.

M. Chen, S. Herbert, and C. J. Tomlin. Exact and Efficient Hamilton-Jacobi-based Guaranteed Safety Analysis via System Decomposition. IEEE International Conference on Robotics and Automation, 2017.

D.P. Zhou, M. Balandat, M.A. Dahleh, and C.J. Tomlin. Eliciting Private User Information for Demand Response. Proceedings of the 56th IEEE Conference on Decision and Control, 2017.

D.P. Zhou, M. Roozbehani, M.A. Dahleh, and C.J. Tomlin. How Peer Effects Influence Energy Consumption. Proceedings of the 56th IEEE Conference on Decision and Control, 2017.

D.P. Zhou, M.A. Dahleh, and C.J. Tomlin. Hedging Strategies in Wholesale Electricity Markets. Proceedings of the 56th IEEE Conference on Decision and Control, 2017.

D.P. Zhou, M. Balandat, and C.J. Tomlin. Estimating Treatment Effects of a Residential Demand Response Program Using Non-Experimental Data. Proceedings of the 2017 International Conference on Data Mining Workshops (ICDM)

O. Ardakanian, Y. Yuan, R. Dobbe, A. Von Meier and C. Tomlin. Event Detection and Localization in Distribution Grids with Phasor Measurement Units. IEEE Power & Energy Society General Meeting. Chicago, July 2017 (Conference Paper Prize Winner).

R. Dobbe, D. Fridovich-Keil, and C. Tomlin. Fully Decentralized Policies for Multi-Agent Systems: An Information Theoretic Approach. Advances in Neural Information Processing Systems: 2945-2954, 2017.

D. Fridovich-Keil, N. Hanford, M. P. Chapman, C. J. Tomlin, M. K. Farrens, and D. Ghosal. A Model Predictive Control Approach to Flow Pacing for TCP. Allerton Conference on Communication, Control, and Computation, 2017.

D.P. Zhou, M. Roozbehani, M. Dahleh, and C. Tomlin. Stability Analysis of Wholesale Electricity Markets under Dynamic Consumption Models and Real-Time Pricing. Proceedings of the 2017 American Control Conference.

D.P. Zhou, Q. Hu, and C. Tomlin. Quantitative Comparison of Data-Driven and Physics-Based Models for Commercial Building HVAC Systems. Proceedings of the 2017 American Control Conference.

M. Chapman, T. Rosom, A. Aswani, R. Dobbe, R. Sears and C. Tomlin. A model of phenotypic state dynamics initiates a promising approach to control heterogeneous malignant cell populations. Proceedings of the 55th IEEE Conference on Decision and Control, December 2016.

M. Chen*, S. Herbert*, and C. J. Tomlin. Fast Reachable Set Approximations via State Decoupling Disturbances. IEEE Conference on Decision and Control, 2016.

D.P. Zhou, M. Balandat, and C. Tomlin. Residential Demand Response Targeting Using Observational Data. 55th Conference on Decision and Control, December 2016.

D.P. Zhou, M. Balandat, and C. Tomlin. A Bayesian Perspective on Residential Demand Response Using Smart Meter Data. 54th Annual Allerton Conference on Communication, Control, and Computing, September 2016.

Q. Hu, F. Oldewurtel, M. Balandat, E. Vrettos, D. Zhou, and C. Tomlin. Building Model Identification during Regular Operation - Empirical Results and Challenges. American Control Conference (ACC), July 2016.

O. Sondermeijer*, R. Dobbe*, D. Arnold, C. Tomlin and T. Keviczky. Regression-based Inverter Control for Decentralized Optimal Power Flow and Voltage Regulation. IEEE Power & Energy Society General Meeting. Boston, July 2016.

D. Arnold, M. Sankur, R. Dobbe, K. Brady, D. Callaway, and A. Von Meier. Optimal Dispatch of Reactive Power for Voltage Regulation and Balancing in Unbalanced Distribution Systems. IEEE Power & Energy Society General Meeting. Boston, July 2016.

R. Dobbe, D. Arnold, D. Callaway and C. Tomlin. Real-Time Distribution Grid State Estimation with Limited Sensors and Load Forecasting. International Conference on Cyber-Physical Systems. Vienna, April 2016.

P. Bhushan, Y. H. Chang, and C. J. Tomlin, Iterative Function Separation for Gene Regulatory Function Identification, To appear at the IEEE Conference on Decision and Control, Osaka, December 2015.

M. Chen and C. J. Tomlin, Exact and Efficient Hamilton-Jacobi Reachability for Decoupled Systems, To appear at the IEEE Conference on Decision and Control, Osaka, December 2015.

Y. H. Chang, R. Dobbe, P. Bhushan, J.W. Gray, and C. J. Tomlin, Retrieving Common Dynamics of Gene Regulatory Network under Various Perturbations, To appear at the IEEE Conference on Decision and Control, Osaka, December 2015.

M. Chen, Q. Hu, C. Mackin, J. F. Fisac, and C. J. Tomlin, Safe Platooning of Unmanned Aerial Vehicles via Reachability, To appear at the IEEE Conference on Decision and Control, Osaka, December 2015.

M. Chapman, T. Rosom, R. Dobbe, R. Sears and C. Tomlin. A linear time-invariant model of phenotype dynamics in breast cancer cell populations (Abstract). 16th International Conference on Systems Biology. Singapore, November 2015.

M. Chapman, T. Rosom, R. Dobbe, R. Sears and C. Tomlin. A linear time-invariant model of phenotype dynamics in breast cancer cell populations (Abstract, accepted for oral presentation). The 8th Annual RECOMB/ISCB RSG Conference. Philadelphia, November 2015.

A. K. Akametalu and C. J. Tomlin, Temporal-Difference Learning for Online Reachability Analysis, 14th Annual European Control Conference, Linz, July 2015.

M. Chen, J. F. Fisac, S. Sastry, C. J. Tomlin, Safe Sequential Path Planning of Multi-Vehicle Systems via Double-Obstacle Hamilton-Jacobi-Isaacs Variational Inequality, 14th Annual European Control Conference, Linz, July 2015.

F. Oldewurtel, L. Roald, G. Andersson, and C. J. Tomlin, Adaptively Constrained Stochastic Model Predictive Control Applied to Security Constrained Optimal Power Flow, American Control Conference, Chicago, July 2015.

M. Balandat, I. Tkachev, A. Abate, and C. J. Tomlin, A Mean Field Equilibrium for a Model of Interbank Lending, American Control Conference, Chicago, July 2015.

I. Yang, D. Callaway, and C. J. Tomlin, Indirect Load Control for Electricity Market Risk Management via Risk Limiting Dynamic Contracts, American Control Conference, Chicago, July 2015.

R. Dobbe, Y. H. Chang, J. Korkola, J. W. Gray, and C. J. Tomlin, Heterogeneity in Cancer Dynamics: A Convext Formulation to Dissect Dynamic Trajectories and infer LTV models of Networked Systems, American Control Conference, Chicago, July 2015.

J. F. Fisac, M. Chen, C. J. Tomlin, S. Sastry, Reach-Avoid Problems with Time-Varying Dynamics, Targets and Constraints, 18th International Conference on Hybrid Systems: Computation and Control (HSCC 2015), Seattle, April 2015.

A. K. Akametalu, and C. J. Tomlin, Towards online reachability analysis with temporal-differencing, 18th International Conference on Hybrid Systems: Computation and Control (HSCC 2015), Seattle, April 2015.

A. K. Akametalu, J. Fisac, J. Gillula, S. Kaynama, M. N. Zeilinger, and C. J. Tomlin, Reachability- based Safe Learning with Gaussian Processes, IEEE Conference on Decision and Control, December 2014.

M. Chen, Z. Zhou, and C. J. Tomlin, A Path Defense Approach to the Multiplayer Reach-Avoid Game, IEEE Conference on Decision and Control, December 2014.

I. Yang, M. N. Zeilinger, and C. J. Tomlin, Utility Learning Model Predictive Control for Personal Electric Loads, IEEE Conference on Decision and Control, December 2014.

J. Thai, A. Bayen, A. K. Akametalu, C. J. Tomlin, and T. Hunter, Inverse Covariance Estimation from Data with Missing Values Using the Concave-Convex Procedure, IEEE Conference on Decision and Control, December 2014.

S. Bansal, M. N. Zeilinger, and C. J. Tomlin, Plug-and-Play Model Predictive Control for Electric Vehicle Charging and Voltage Control in Smart Grids, IEEE Conference on Decision and Control, December 2014.

J. Lu, Y. H. Chang,M. Chen, M. Tomizuka, J. Carmena and C. J. Tomlin, Design of Neural Decoder by Sensory Prediction and Error Correction, IEEE Conference on Decision and Control, December 2014.

Y. H. Chang, Roel Dobbe, Palak Bhushan, J. W. Gray, and C. J. Tomlin, Reconstruction of Gene Regulatory Networks based on Repairing Sparse Low-rank Matrices, Accepted for oral presentation at RECOMB/ISCB Regulatory and Systems Genomics Conference, November 2014.

M. Balandat, F. Oldewurtel, M. Chen, and C. J. Tomlin, Contract Design for Frequency Regula- tion by Aggregations of Commercial Buildings, 52nd Annual Allerton Conference on Communication, Control, and Computing (Allerton), October 2014.

Roel Dobbe, Young Hwan Chang, Jim Korkola, Joe W. Gray, Claire Tomlin, An Efficient algo- rithm to retrieve a dynamic model and heterogeneous treatment response in HER2+ breast cancer, The International Conference on Systems Biology, September 2014.

Young Hwan Chang, Mo Chen, Maryam Shanechi, Jose Carmena and Claire Tomlin, Design of a Neural Decoder by Reducing Discrepancy between Manual Control (MC) and Brain Control (BC), European Control Conference, June 2014.

Young Hwan Chang and Claire Tomlin, Reconstruction of Gene Regulatory Networks with Hidden Node, European Control Conference, June 2014.

I. Yang, D. Callaway, C. J. Tomlin, Dynamic contracts with partial observations: Application to indirect load control, American Control Conference, Portland, June 2014.

M. Chen, Z. Zhou, C. J. Tomlin, Multiplayer Reach-Avoid Games, American Control Conference, Portland, June 2014.

Z. Zhou, M. P. Vitus, and C. J. Tomlin, Convexity Verification for a Hybrid Chance Constrained Method in Stochastic Control Problems, American Control Conference, Portland, June 2014.

I. Yang, and C. J. Tomlin, Regularization-based Identification for Level Set Equations, IEEE Conferenceon Decision and Control, Florence, December 2013.

I. Yang, S. Burden, S. Sastry, and C. J. Tomlin, Infinitesimal Interconnection Variation in Nonlinear Networked Systems, IEEE Conference on Decision and Control, Florence, December 2013.

M. P. Vitus, and C. J. Tomlin, A Probabilistic Approach to Planning and Control in Autonomous Urban Driving, IEEE Conference on Decision and Control, Florence, December 2013.

Y. H. Chang, M. Chen, S. Gowda, S. A. overduin, J. M. Carmena and C. J. Tomlin, Low-rank Representation of Neural Activity and Detection of Submovement, IEEE Conference on Decision and Control, Florence, December 2013.

M. Maasoumy, P. Nuzzo, F. Iandola, M. Kamgarpour, A. Sangiovanni-Vincentelli, and C. J. Tomlin, Optimal Load Management System for Aircraft Electric Power Distribution, IEEE Conference on Decision and Control, Florence, December 2013.

M. Balandat and C. J. Tomlin, A Dynamic VCG Mechanism for Random Allocation Spaces, 51st Annual Allerton Conference on Communication, Control, and Computing (Allerton), October 2013.

M. Balandat and C. J. Tomlin, On efficiency in Mean Field Differential Games, In the Proceedings of the American Control Conference (ACC), pp. 2527-2532, June 2013.

Y. H. Chang and C. J. Tomlin, Data-driven Graph Reconstruction using Compressive Sensing, Proceedings of the 51st IEEE Conference on Decision and Control, Maui, December 2012.

M. P. Vitus and C. J. Tomlin, A Hybrid Method for Chance Constrained Control in Uncertain Environments, Proceedings of the 51st IEEE Conference on Decision and Control, Maui, December 2012.

Z. Zhou, R. Takei, H. Huang, and C. J. Tomlin, A General, Open-Loop Formulation for Reach-Avoid Games, Proceedings of the 51st IEEE Conference on Decision and Control, Maui, December 2012.

M. Soler, M. Kamgarpour, C. J. Tomlin, and E. Staffetti, Multiphase Mixed-Integer Optimal Control Framework for Aircraft Conflict Avoidance, Proceedings of the 51st IEEE Conference on Decision and Control, Maui, December 2012.

A. Aswani and C. J. Tomlin, Incentive Design for Efficient Building Quality of Service, 50th Annual Allerton Conference on Communication, Control, and Computing (Allerton), October 2012.

Y. H. Chang and C. J. Tomlin, Modeling Response of Biological Signal Pathways using a Hybrid Boolean Framework, Proceedings of the ASME Dynamic Systems and Control Conference, October 2012.

M. P. Vitus, W. Zhang, D. Rus, and C. J. Tomlin, A Hierarchical Method for Stochastic Motion Planning in Uncertain Environments, IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS), October 2012.

A. Aswani, N. Master, J. Taneja, A. Krioukov, D. Culler, and C. J. Tomlin, Quantitative methods for comparing different HVAC control schemes, International Conference on Performance Evaluation Methodologies and Tools, September 2012.

A. Aswani, N. Master, J. Taneja, A. Krioukov, D. Culler, and C. Tomlin, Energy-efficient building HVAC control using hybrid system LBMPC, Proceedings of IFAC Conference on Nonlinear Model Predictive Control, August 2012.

J. H. Gillula and C. J. Tomlin, Reducing conservativeness in Safety Guarantees by Learning Dis- turbances Online: Iterated Guaranteed Safe Online Learning, Proceedings of Robotics: Science and Systems (RSS), July 2012.

S. Pan, H. Huang, J. Ding, W. Zhang, D. Stipanovic, and C. J. Tomlin, Pursuit, Evasion, and Defense in the Plane, Proceedings of the American Control Conference, June 2012.

A. Aswani, N. Master, J. Taneja, V. Smith, A. Krioukov, D. Culler, and C. Tomlin, Identify- ing models of HVAC systems using semi-parametric regression, Proceedings of the American Control Conference, pp. 3675-3680, June 2012.

A. Aswani, P. Bouffard, and C. Tomlin, Extensions of learning-based model predictive control for real-time application to a quadrotor helicopter, Proceedings of the American Control Conference: pp. 4661-4666, June 2012.

J. H. Gillula and C. J. Tomlin, Guaranteed Safe Online Learning via Reachability: Tracking a Ground Target using a Quadrotor, Proceedings of IEEE International Conference on Robotics and Automation: pp. 2723-2730, May 2012.

P. Bouffard, A. Aswani, and C. Tomlin, Learning-based model predictive control on a quadrotor: Onboard implementation and experimental results, Proceedings of IEEE International Conference on Robotics and Automation: pp. 279-284, May 2012.

R. Takei, H. Huang, J. Ding, and C. J. Tomlin, Time-optimal multi-stage motion planning with guaranteed collision avoidance via an open-loop game formulation, Proceedings of the IEEE International Conference on Robotics and Automation (ICRA 2012), May 2012.

P. Park and C. J. Tomlin, Investigating Communication Infrastructure of Next Generation Air Traffic Management, Proceedings of the ACM/IEEE International Conference on Cyber-Physical Systems, April 2012.

M. Kamgarpour, J. Ding, S. Summers, A. Abate, J. Lygeros, and C. J. Tomlin, Discrete time Stochastic Hybrid Dynamic Games: Verification and Controller Synthesis, Proceedings of the IEEE Conference on Decision and Control, pp. 6122-6127, December 2011.

H. Huang, W. Zhang, J. Ding, D. Stipanovic, and C. J. Tomlin, Guaranteed Decentralized PursuitEvasion in the Plane with Multiple Pursuers, Proceedings of the IEEE Conference on Decision and Control, pp. 4835-4840, December 2011.

Y. H. Chang, and C. J. Tomlin, Inference of Temporally Evolving Network Dynamics with Applications in Biological Systems, Proceedings of the 50th IEEE Conference on Decision and Control, Orlando, December 2011.

M. P. Vitus and C. J. Tomlin, On Feedback Design and Risk Allocation in Chance constrained control, Proceedings of the 50th IEEE Conference on Decision and Control, Orlando, December 2011.

M. P. Vitus and C. J. Tomlin, Belief Space Planning for Linear Gaussian Systems in Uncertain Environments, 18th World Congress of the International Federation of Automatic Control, September 2011.

M. Kamgarpour, M. Soler, C. J. Tomlin, A. Olivares, J. Lygeros, Hybrid Optimal Control for Aircraft Trajectory Design with a Variable Sequence of Modes, 18th World Congress of the International Federation of Automatic Control, September 2011.

M. Kamgarpour, W. Zhang, and C. J. Tomlin, Modeling and Optimization of Terminal Airspace and Aircraft Arrival subject to Weather Uncertainties, Proceedings of the AIAA Guidance, Navigation, and Control Conference, pp. 6516-6521, August 2011.

M. Schwager, M. P. Vitus, D. Rus, and C. J. Tomlin, Robust Adaptive Coverage for Robotic Sensor Networks, Proceedings of the International Symposium on Robotics Research (ISRR), August 2011.

J. Gillula and C. J. Tomlin, Guaranteed Safe Online Learning of a Bounded System, Proceedings of the IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS), pp. 2979-2984, June 2011.

Aswani and C. Tomlin, Game-theoretic routing of GPS-assisted vehicles for energy efficiency, Proceedings of the American Control Conference: pp. 3375-3380, June 2011.

Y. H. Chang, C. J. Tomlin, and J. K. Hedrick, Biologically-inspired Coordination of Multiple UAVs using Sliding Mode Control, Proceedings of the American Control Conference, San Francisco, June 2011.

W. Zhang, M. Kamgarpour, D. Sun, and C. J. Tomlin, Decentralized Flight Planning for Air Traffic Management, Proceedings of the American Control Conference, San Francisco, pp. 2137-2142, June 2011.

Y. H. Chang, J. Gray, and C. J. Tomlin, Optimization-based Inference for Temporally Evolving Boolean Networks with Applications in Biology, Proceedings of the American Control Conference, San Francisco, June 2011.

M. P. Vitus, and C. J. Tomlin, Optimal Closed-Loop Belief Space Planning for Linear, Gaussian Systems, Proceedings of the 2011 IEEE International Conference on Robotics and Automation, Shanghai, May 2011.

H. Huang, J. Ding, W. Zhang, and C. J. Tomlin, A Differential Game Approach to Planning in Adversarial Scenarios: A Case Study on Capture-the-Flag, Proceedings of the 2011 IEEE International Conference on Robotics and Automation, Shanghai, May 2011.

J. Ding, E. Li, H. Huang, and C. J. Tomlin, Reachability-based Synthesis of Feedback Policies for Motion Planning under Bounded Disturbances, Proceedings of the 2011 IEEE International Conference on Robotics and Automation, Shanghai, May 2011.

R. Brockers, P. Bouffard, J. Ma, L. Matthies, and C. J. Tomlin, Autonomous Landing and Ingress of Micro-Air Vehicles in Urban Environments based on Monocular Vision, SPIE Conference on Micro and Nanotechnology Sensors, Systems, and Applications, April 2011.

S. Summers, M. Kamgarpour, C. J. Tomlin, and J. Lygeros, A Stochastic Reach-avoid Problem with Random Obstacles, Proceedings of the 14th International ACM Conference on Hybrid Systems: Computation and Control (HSCC11), Chicago, April 2011.

A. Aswani and C. J. Tomlin, Computer-Aided Drug Discovery for Pathway and Genetic Diseases, Proceedings of the 49th IEEE Conference on Decision and Control, Atlanta, December 2010.

W. Zhang, M. P. Vitus, J. Hu, A. Abate, and C. J. Tomlin, On the Optimal Solutions of the Infinite Horizon Linear Sensor Scheduling Problem, Proceedings of the 49th IEEE Conference on Decision and Control, Atlanta, December 2010.

M. P. Vitus,W. Zhang, A. Abate, J. Hu, and C. J. Tomlin, On Sensor Scheduling of Linear Dynamical Systems withe Error Bounds, Proceedings of the 49th IEEE Conference on Decision and Control, Atlanta, December 2010.

M. Kamgarpour, V. Dadok, and C. J. Tomlin, Trajectory Generation for Multiple Aircraft Subject to Dynamic Weather Uncertainty, Proceedings of the 49th IEEE Conference on Decision and Control, Atlanta, December 2010.

J. Ding and C. J. Tomlin, Robust Reach-Avoid Controller Synthesis for Switched Nonlinear Systems, Proceedings of the 49th IEEE Conference on Decision and Control, Atlanta, December 2010.

H. Gonzales, R. Vasudevan, M. Kamgarpour, S. Sastry, R. Bajcsy, and C. J. Tomlin, A Numerical Method for the Optimal Control of Switched Systems, Proceedings of the 49th IEEE Conference on Decision and Control, Atlanta, December 2010.

S. Itani and C. J. Tomlin, An ODE Model for the HER2/3-AKT Signaling Pathways in Cancers that Overexpress HER2, Proceedings of the American Control Conference, Baltimore, June 2010. This paper was subsequently invited as the lead paper (with a 40 minute presentation) to a session on Control Systems in Cancer at the ACC.

M. Kamgarpour and C. J. Tomlin, Modeling and Analysis of Cell Differentiation using hybrid systems, Proceedings of the American Control Conference, Baltimore, June 2010.

M. P. Vitus, W. Zhang, A. Abate, J. Hu, and C. J. Tomlin, On Efficient Sensor Scheduling for Linear Dynamical Systems, Proceedings of the American Control Conference, Baltimore, June 2010.

M. P. Vitus and C. J. Tomlin, Sensor Placement for Improved Robotic Navigation, Proceedings of Robotics: Science and Systems (RSS), June 2010.

J. Gillula, H. Huang, M. Vitus, and C. J. Tomlin, Design of Guaranteed Safe Maneuvers using Reachable Sets: Autonomous Quadrotor Aerobatics in Theory and Practice, Proceedings of the 2010 IEEE International Conference on Robotics and Automation (ICRA), pp. 1649-1654, May 2010.

H. Gonzalez, R. Vasudevan, M. Kamgarpour, S. Sastry, R. Bajcsy, and C. J. Tomlin, A Descent Algorithm for the Optimal Control of Constrained Switched Nonlinear Dynamical Systems, Proceedings of the 13th International ACM Conference on Hybrid Systems: Computation and Control (HSCC10), Stockholm, April, 2010.

H. Huang and C. J. Tomlin, A Hybrid System Model of Air Traffic Controller Cognition, 89th Transportation Research Board Annual Meeting, Washington DC, January 2010.

J. Ding, and C. J. Tomlin, Trajectory Optimization in Convex Underapproximations of Safe Regions, In the Proceedings of the 48th IEEE Conference on Decision and Control, December 2009.

A. Aswani, H. Guturu, and C. J. Tomlin, System Identification of Hunchback Protein Patterning in Early Drosophila Embryogensis, In the Proceedings of the 48th IEEE Conference on Decision and Control, December 2009.

J. Gillula, H. Huang, M. Vitus, and C. J. Tomlin, Reachable Sets for Maneuver Scheduling and Design: Applications to Autonomous Quadrotor Aerobatics, In the Proceedings of the 14th International Symposium on Robotics Research (ISRR), pp. 139-149, September 2009.

J. Ding, and C. J. Tomlin, Aircraft conflict detection: a dynamic programming approach, In the Proceedings of the AIAA Guidance, Navigation, and Control Conference, August 2009.

H. Huang and C. J. Tomlin, A network-based approach to en-route sector aircraft trajectory planning, In the Proceedings of the AIAA Guidance, Navigation, and Control Conference, August 2009.

A. Aswani, N. Boyd, and C. J. Tomlin, Graph-theoretic topological control of biological genetic networks, In the Proceedings of the AACC American Control Conference, June 2009.

H. Huang, G. M. Hoffmann, S. L. Waslander, and C. J. Tomlin, Aerodynamics and Control of Autonomous Quadrotor Helicopters in Aggressive Maneuvering, In the Proceedings of the IEEE Int. Conf. on Robotics and Automation (ICRA), Kobe, Japan, May 2009.

A. Aswani, P. Bickel, and C. J. Tomlin, Statistics for Sparse, High-Dimensional, and Nonparametric System Identification, In the Proceedings of the IEEE Int. Conf. on Robotics and Automation (ICRA), Kobe, Japan, May 2009.

G. M. Hoffmann and C. J. Tomlin, Decentralized Cooperative Collision Avoidance for Acceleration Constrained Vehicles, In the Proceedings of the 47th IEEE Conference on Decision and Control, Cancun, Mexico, December 2008.

M. P. Vitus, S. L. Waslander, and C. J. Tomlin, Locally optimal decomposition for autonomous obstacle avoidance with the Tunnel-MILP algorithm, In the Proceedings of the 47th IEEE Conference on Decision and Control, Cancun, Mexico, December 2008.

A. Aswani and C. J. Tomlin, Topology Based Control of Biological Genetic Networks, In the Proceedings of the 47th IEEE Conference on Decision and Control, Cancun, Mexico, December 2008.

J. Ding, J. Sprinkle, S. S. Sastry, and C. J. Tomlin, Reachability Calculations for Automated Aerial Refueling, In the Proceedings of the 47th IEEE Conference on Decision and Control, Cancun, Mexico, December 2008.

M. Kamgarpour, and C. J. Tomlin, Performance of Consensus-based Decentralized Kalman Filter, In the Proceedings of the 47th IEEE Conference on Decision and Control, Cancun, Mexico, December 2008.

G. M. Hoffmann, S. L. Waslander, and C. J. Tomlin, Quadrotor Helicopter Trajectory Tracking Control, Proceedings of the AIAA Guidance, Navigation, and Control Conference, August 2008.

M. P. Vitus, V. Pradeep, G. M. Hoffmann, S. L. Waslander and C. J. Tomlin, Tunnel-MILP: Path Planning with Sequential Convex Polytopes, Proceedings of the AIAA Guidance, Navigation, and Control Conference, August 2008.

M. P. Vitus and C. J. Tomlin, Hierarchical, Hybrid Framework for Collision Avoidance Algorithms in the National Airspace, Proceedings of the AIAA Guidance, Navigation, and Control Conference, August 2008.

K. Roy and C. J. Tomlin, Traffic Flow Management using Finite Impulse Response Filter and Supply Chain Methods, Proceedings of the AIAA Guidance, Navigation, and Control Conference, August 2008.

K. Roy, H. Huang, S. L. Waslander, and C. J. Tomlin, A Plug and Play Framework for Automated Air Traffic Control, Proceedings of the AIAA Guidance, Navigation, and Control Conference, August 2008.

R. Raffard, O. Lipan,W.Wong, and C. J. Tomlin, Optimal Discovery of a Stochastic Genetic Network, Proceedings of the AACC American Control Conference, Seattle, June 2008.

G. M. Hoffmann, H. Huang, S. L. Waslander, and C. J. Tomlin, Quadrotor Helicopter Flight Dynamics and Control: Theory and Experiment, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Hilton Head, AIAA Paper Number 2007-6461, August 2007.

G.M. Hoffmann, D. Gorinevsky, R.W.Mah, C. J. Tomlin, and J. D.Mitchell, Fault Tolerant Relative Navigation using Inertial and Relative Sensors, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Hilton Head, AIAA Paper Number 2007-6789, August 2007.

H. Huang, K. Roy, and C. J. Tomlin, Probabilistic Estimation of State-Dependent Hybrid Mode Transitions for Aircraft Arrival Time Prediction, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Hilton Head, August 2007.

K. Roy and C. J. Tomlin, Solving the Aircraft Routing Problem using Network Flow Algorithms, Proceedings of the AACC American Control Conference, New York, July 2007.

G. M. Hoffmann, C. J. Tomlin, M. Montemerlo, and S. Thrun, Autonomous Automobile Trajectory Tracking for Off-Road Driving: Controller Design, Experimental Validation and Racing, Proceedings of the AACC American Control Conference, New York, July 2007.

S. L. Waslander and C. J. Tomlin, Convergence of lump-sum markets with price-anticipating agents, Proceedings of the AACC American Control Conference, New York, July 2007.

R. L. Raffard, K. Amonlirdviman, J. D. Axelrod, and C. J. Tomlin, Automatic parameter identification via the adjoint method, with application to understanding planar cell polarity, Proceedings of the 45th IEEE Conference on Decision and Control, San Diego, December 2006.

R. L. Raffard and C. J. Tomlin, Tractable algorithm for open loop stochastic control, Proceedings of the 45th IEEE Conference on Decision and Control, San Diego, December 2006.

M. K. Oishi, I. Mitchell, C. J. Tomlin, and P. St.-Pierre, Computing Viable Sets and Reachable Sets to Design Feedback Linearizing Control Laws Under Saturation, Proceedings of the 45th IEEE Conference on Decision and Control, San Diego, December 2006.

S. L. Waslander and C. J. Tomlin, Efficient market-based air traffic flow control with competing airlines, Proceedings of the 45th IEEE Conference on Decision and Control, San Diego, December 2006.

G. M. Hoffmann, S. L. Waslander, and C. J. Tomlin, Mutual Information Methods with Particle Filters for Mobile Sensor Network Control, Proceedings of the 45th IEEE Conference on Decision and Control, San Diego, December 2006.

K. Roy, B. Levy and C. J. Tomlin, Target Tracking and Estimated Time of Arrival (ETA) Predic- tion for Arrival Aircraft, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Keystone, AIAA Paper 2006-6324, August 2006.

G.M. Hoffmann, S. L.Waslander, and C. J. Tomlin, Distributed cooperative search using information- theoretic costs for particle filters with quadrotor applications, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Keystone, AIAA Paper 2006-6576, August 2006. http:arc.aiaa.org

*doi*abs*10.2514*6.2006-6576K. Roy, and C. J. Tomlin, Enroute Airspace Control and Controller Workload Analysis using a Novel Slot-Based Sector Model, Proceedings of the AACC American Control Conference, Minneapolis, pp. 1044-1049, June 2006.

S. L. Waslander, R. L. Raffard, and C. J. Tomlin, Toward efficient and equitable market-based air traffic flow control, Proceedings of the AACC American Control Conference, Minneapolis, pp. 5189-5194, June 2006.

R. L. Raffard, K. Amonlirdviman, J. D. Axelrod, and C. J. Tomlin, 2005 Parameter Identification via the Adjoint Method: Application to Protein Regulatory Networks, Proceedings of the IFAC 2006 International Symposium on Advanced Control of Chemical Processes, pp. 475-482, April 2006.

R. L. Raffard, S. L. Waslander, A. M. Bayen and C. J. Tomlin, Cooperative Distributed Control for a Multi-Agent Eulerian Air Traffic Network, Proceedings of the AIAA Conference on Guidance, Navigation and Control, AIAA Paper 2005-6050, San Francisco, August 2005.

K. Roy, A. M. Bayen and C. J. Tomlin, Polynomial Time Algorithms for Scheduling of Arrival Aircraft, Proceedings of the AIAA Conference on Guidance, Navigation and Control, AIAA Paper 2005-6044, San Francisco, August 2005.

J. S. Jang and C. J. Tomlin, Control Strategies in Multi-Player Pursuit and Evasion Game, Proceedings of the AIAA Conference on Guidance, Navigation and Control, AIAA Paper 2005-6239, San Francisco, August 2005.

R. Teo, J. S. Jang, and C. J. Tomlin, Flight demonstration of Provable Safe Closely Spaced Parallel Approaches, Proceedings of the AIAA Conference on Guidance, Navigation and Control, San Francisco, August 2005.

S. L. Waslander, G. M. Hoffmann, J. S. Jang, and C. J. Tomlin, Multi-Agent X4-Flyer Testbed Control Design: Integral Sliding Mode vs. Reinforcement Learning, Proceedings of the International Conference on Intelligent Robots and Systems (IROS 2005), Edmonton, pp. 468-473, August 2005.

R. Ghosh and C. J. Tomlin, A Query-Based Technique for Interpreting Reachable Sets for Hybrid Automaton Models of Protein Feedback Signaling, Proceedings of the AACC American Control Conference, Portland, June 2005.

R. L. Raffard and C. J. Tomlin, Second Order Optimization of Ordinary and Partial Differential Equations with Application to Air Traffic Flow, Proceedings of the AACC American Control Conference, Portland, pp. 798-803, June 2005.

J. Hu, M. Prandini, and C. J. Tomlin, Interesting Conjugate Points in Formation Constrained Optimal Multi-Agent Coordination, Proceedings of the AACC American Control Conference, Portland, pp. 1871-1876, June 2005.

A. M. Bayen, C. J. Tomlin, Y. Ye, and J. Zhang, An Approximation Algorithm for Scheduling Aircraft with Holding Time, Proceedings of the 43rd IEEE Conference on Decision and Control, Atlantis, Bahamas, pp. 2760-2767, December 2004.

R. Ghosh and C. J. Tomlin, An Algorithm for Reachability Computations on Hybrid Automata Models of Protein Signaling Networks, Proceedings of the 43rd IEEE Conference on Decision and Control, Atlantis, Bahamas, pp. 2256-2261, December 2004.

I. Hwang, K. Roy, H. Balakrishnan, and C. J. Tomlin, A Distributed Multiple-Target Identity Management Algorithm in Sensor Networks, Proceedings of the 43rd IEEE Conference on Decision and Control, Atlantis, Bahamas, pp. 728-734, December 2004.

R. Raffard, C. J. Tomlin, and S. P. Boyd, Distributed Optimization for Cooperative Agents: Application to Formation Flight, Proceedings of the 43rd IEEE Conference on Decision and Control, Atlantis, Bahamas, pp. 2453-2459, December 2004.

H. Balakrishnan, I. Hwang, and C. J. Tomlin, Polynomial Approximation Algorithms for Belief Matrix Maintenance in Identity Management, Proceedings of the 43rd IEEE Conference on Decision and Control, Atlantis, Bahamas, pp. 4874-4879, December 2004.

R. Teo, J. S. Jang,, and C. J. Tomlin, Automated Multiple UAV Flight ? the Stanford DragonFly UAV Program, Proceedings of the 43rd IEEE Conference on Decision and Control, Atlantis, Bahamas, pp. 4268?4273, December 2004.

G. Hoffman, D. G. Rajnarayan, S. L. Waslander, D. Dostal, J. S. Jang, and C. J. Tomlin, The Stanford Testbed of Autonomous Rotorcraft for multi-agent control (STARMAC), Proceedings of the 23rd Digital Avionics System Conference, Salt Lake City, pp. 12E4 1?10, October 2004.

A. M. Bayen, T. Callantine, C. J. Tomlin, Y. Ye, and J. Zhang, Optimal Arrival Traffic Spacing via Dynamic Programming, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Providence, Paper AIAA-2004-5228, August 2004.

A. M. Bayen, R. L. Raffard, and C. J. Tomlin, Eulerian Network Model of Air Traffic Flow in Congested Areas, In the Proceedings of the AACC American Control Conference, Boston, pp. 5520- 5526, June 2004.

A. M. Bayen, R. L. Raffard, and C. J. Tomlin, Adjoint-Based Constrained Control of Eulerian Transportation Networks: Application to Air Traffic Control, In the Proceedings of the AACC American Control Conference, Boston, pp. 5539-5545, June 2004.

I. Hwang, H. Balakrishnan, K. Roy, and C. J. Tomlin, Multiple-Target Tracking and Identity Management in Clutter for Air Traffic Control, Proceedings of the AACC American Control Conference, Boston, pp. 3422-3428, June 2004.

M. Oishi, I. Hwang, and C. J. Tomlin, Immediate Observability of Discrete Event Systems with Application to User-Interface Design, Proceedings of the 42nd IEEE Conference on Decision and Control, Maui, pp. 2665-2672, December 2003.

A. Bayen, C. Tomlin, Y. Ye, J. Zhang, MILP formulation and polynomial time algorithm for an aircraft scheduling problem, Proceedings of the 42nd IEEE Conference on Decision and Control, Maui, pp. 5003-5010, December 2003.

I. Hwang, H. Balakrishnan, C. Tomlin, Performance Analysis of Hybrid Estimation Algorithms, Proceedings of the 42nd IEEE Conference on Decision and Control, Maui, pp. 5353-5359, December 2003.

R. Teo, D. Stipanovic, C. Tomlin, Decentralized Spacing Control of a String of Multiple Vehicles over Lossy Datalinks, Proceedings of the 42nd IEEE Conference on Decision and Control, Maui, pp. 682-687, December 2003.

I. Hwang, H. Balakrishnan, K. Roy, J. Shin, L. Guibas, and C. J. Tomlin, A Multiple-Target Tracking and Identity Management Algorithm for Air Traffic Control, In the Proceedings of the 2nd IEEE Sensors Conference, Toronto, pp. 36-41, October 2003.

I. Hwang, H. Balakrishnan, and C. Tomlin, Observability Criteria and Estimator Design for Stochastic Linear Hybrid Systems, Proceedings of IEE European Control Conference, Cambridge, UK, September 2003.

D. M. Stipanovic, I. Hwang, G. Inalhan, and C. Tomlin, Computation of an Over-Approximation of the Backward Reachable Set using Subsystem Level Set Functions, Proceedings of IEE European Control Conference, Cambridge, UK, September 2003.

I. Hwang, J. Hwang, and C. Tomlin, Flight-Mode-Based Aircraft Conflict Detection using a Residual- Mean Interacting Multiple Model Algorithm, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Austin, AIAA-2003-5340, August 2003.

A. M. Bayen, S. Santhanam, I. Mitchell, and C. J. Tomlin, A differential game formulation of alert levels in ETMS data for high altitude traffic, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Austin, AIAA-2003-5341, August 2003.

J. S. Jang, and C. J. Tomlin, Longitudinal Stability Augmentation System Design for the Dragon- Fly UAV using a Single GPS Receiver, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Austin, AIAA-2003-5592, August 2003.

A. M. Bayen, and C. J. Tomlin, Real-time discrete control law synthesis for hybrid systems using MILP: Application to congested airspace, Proceedings of the AACC American Control Conference, Denver, pp. 4620-4626, June 2003.

I. Hwang, D. Stipanovic, and C. J. Tomlin, Application of Polytopic Approximations of Reachable Sets to Linear Dynamic Games and a Class of Nonlinear Systems, Proceedings of the AACC American Control Conference, Denver, pp. 4613-4619, June 2003.

K. Amonlirdviman, R. Ghosh, J. D. Axelrod, and C. Tomlin, A Hybrid Systems Approach to Modeling and Analyzing Planar Cell Polarity, Proceedings of the International Conference on Systems Biology, Stockholm, December 2002.

D. M. Stipanovic, G. Inalhan, R. Teo, and C. Tomlin, Decentralized overlapping control of a formation of unmanned aerial vehicles, Proceedings of the 41st IEEE Conference on Decision and Control, Las Vegas, pp. 2829-2835, December 2002.

M. Oishi, I. Mitchell, A. Bayen, C. Tomlin, and A. Degani, Hybrid verification of an interface for an automatic landing, Proceedings of the 41st IEEE Conference on Decision and Control, Las Vegas, pp. 1607-1613, December 2002.

R. Ghosh, K. Amonlirdviman, C. Tomlin, A hybrid systems model of planar cell polarity signaling in drosophila melanogaster wing epithelium, Proceedings of the 41st IEEE Conference on Decision and Control, Las Vegas, pp. 1588-1594, December 2002.

G. Inalhan, D. Stipanovic, and C. Tomlin, Decentralized Optimization, with application to Multiple Aircraft Coordination, Proceedings of the 41st IEEE Conference on Decision and Control, Las Vegas, pp. 1147-1155, December 2002. Finalist for best student paper.

R. Teo, D. Stipanovic, and C. Tomlin, Multiple Vehicle Control over a Lossy Datalink, Proceedings of the Asian Control Conference, Singapore, pp. 2063-2068, September 2002.

A. Bayen, P. Grieder, C. Tomlin, A Control Theoretic Predictive Model for Sector-Based Air Traffic Flow, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Monterey, AIAA-2002- 5011, August 2002.

J. S. Jang and C. Tomlin, Design and Implementation of a Low Cost, Hierarchical and Modular Avionics Architecture for the DragonFly UAVs, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Monterey, AIAA-2002-4465, August 2002.

A. Bayen, P. Grieder, H. Sipma, C. Tomlin, and G. Meyer, Delay predictive models of the national airspace system using hybrid control theory: design, simulations, and proofs, Proceedings of the AACC American Control Conference, Anchorage, pp. 767-772, May 2002.

I. Hwang and C. Tomlin, Protocol-based Conflict Resolution for Finite Information Horizon, Proceedings of the AACC American Control Conference, Anchorage, pp. 748-753, May 2002.

A. Bayen and C. Tomlin, A construction procedure using characteristics for viscosity solutions of the Hamilton-Jacobi equation, Proceedings of the 40th IEEE Conference on Decision and Control, Orlando, pp. 1657-1662, December 2001.

R. Ghosh and C. Tomlin, A Suitable Switch: Parameter Constraints for a Hybrid Model of Lateral Inhibition through Delta-Notch Signaling, 39th Annual Allerton Conference on Communication, Control, and Computing, October 2001.

J. Evans, G. Inalhan, J. S. Jang, R. Teo, and C. Tomlin, DragonFly: A versatile UAV platform for the advancement of aircraft navigation and control, Proceedings of the 20th Digital Avionics System Conference, Daytona Beach, pp. 1C3/1-12, October 2001.

R. Teo and C. Tomlin, Provably Safe Evasive Maneuvers against Blunders in Closely Spaced Parallel Approaches, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Montreal, AIAA Paper Number 2001-4293, August 2001.

J. S. Jang and C. Tomlin, Autopilot Design for the Stanford DragonFly UAV: Validation through Hardware-in-the-Loop Simulation, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Montreal, AIAA Paper Number 2001-4179, August 2001.

N. Shishido and C. Tomlin, Ellipsoidal Approximations of Reachable Sets for Linear Games, Proceedings of the 39th IEEE Conference on Decision and Control, Sydney, pp. 999-1004 December 2000.

R. Teo and C. Tomlin, Computing Provably Safe Aircraft to Aircraft Spacing for Closely Spaced Parallel Approaches, Proceedings of the 19th Digital Avionics System Conference, Philadelphia, pp. 2D2/1-9 October 2000.

R. Ghosh and C. Tomlin, Nonlinear Inverse Dynamic Control for Mode Based Flight, Proceedings of the AIAA Guidance, Navigation, and Control Conference, Denver, AIAA Paper Number 2000-4066, August 2000.

M. Oishi and C. Tomlin, Switching in nonminimum phase nonlinear systems, Proceedings of the AACC American Control Conference, Chicago, pp. 487-491, June 2000.

R. Ghosh and C. Tomlin, Maneuver Design for Multiple Aircraft Conflict Resolution, Proceedings of the AACC American Control Conference, Chicago, pp. 672-676, June 2000.

C. Tomlin, Towards Efficient Computation of Solutions to Hybrid Systems, Proceedings of the 38th IEEE Conference on Decision and Control, Phoenix, pp. 3532-3537, December 1999.

M. Oishi and C. Tomlin, Switched Nonlinear Control of a VSTOL Aircraft, Proceedings of the 38th IEEE Conference on Decision and Control, Phoenix, pp. 2685-2690 December 1999.

J. Evans, W. Hodge, J. Liebman, C. Tomlin, and B. Parkinson, Flight Tests of an Unmanned Aerial Vehicle with Integrated Multi-Antenna GPS and IMU: Towards a Testbed for Distributed Control and Formation Flight, Proceedings of the ION-GPS Conference, Nashville, pp. 1799-1808, September 1999.

C. Tomlin, Towards Automated Conflict Resolution in Air Traffic Control, Proceedings of the IFAC World Congress, Beijing, pp. 401-406, July 1999.

C. Tomlin, J. Lygeros, and S. Sastry, Computation of Controllers for Nonlinear Hybrid Systems, Proceedings of the IFAC World Congress, Beijing, pp. 18-24, July 1999.

C. Tomlin, J. Lygeros, and S. Sastry, Controller Synthesis for Hybrid Systems: Hamilton-Jacobi Approach, Proceedings of 1999 Spring Symposium Series. Hybrid Systems and AI: Modeling Analysis and Control of Discrete + Continuous Systems, Stanford, pp. 192-197, March 1999.

C. Tomlin, Y. Ma, and S. Sastry, Free Flight in 2000: Games on Lie Groups, Proceedings of the 37th IEEE Conference on Decision and Control, Tampa, pp. 2234-2239, December 1998.

J. Kosecka, C. Tomlin, G. Pappas, and S. Sastry, 2-1/2 D conflict resolution maneuvers for ATMS, Proceedings of the 37th IEEE Conference on Decision and Control, Tampa, pp. 2650-2655, December 1998.

A. Bicchi, A. Parlangeli, G. Pappas, M. Pardini, S. Sastry, and C. Tomlin, On Performance and Robustness of Decentralized Air Traffic Management Systems, Proceedings of the IFAC Workshop on Motion Control, Grenoble, France, pp. 259-265, September 1998.

C. Tomlin, J. Lygeros, and S. Sastry, Aerodynamic Envelope Protection using Hybrid Control, Proceedings of the AACC American Control Conference, Philadelphia, pp. 1793-1796, June 1998.

C. Tomlin, G. Pappas, and S. Sastry, Noncooperative Conflict Resolution, Proceedings of the 36th IEEE Conference on Decision and Control, San Diego, pp. p. 1816-1821, December 1997.

C. Tomlin and S. Sastry, Switching through Singularities, Proceedings of the 36th IEEE Conference on Decision and Control, San Diego, pp. 1-6, December 1997.

J. Lygeros, C. Tomlin and S. Sastry, Multi-objective hybrid controller synthesis: least restrictive controls, Proceedings of the 36th IEEE Conference on Decision and Control, San Diego, pp. 127-132, December 1997.

C. Tomlin, G. Pappas, J. Kosecka, J. Lygeros, and S. Sastry, A next generation architecture for air traffic management, In Control Problems in Robotics and Automation: International Workshop, San Diego, pp. 261-295, December 1997.

T. John Koo, Y. Ma, G. Pappas, and C. Tomlin, SmartATMS: a simulator for air traffic management systems, Proceedings of the 1997 Winter Simulation Conference, Atlanta, pp. 1199-1205, December 1997.

J. Kosecka, C. Tomlin, G. Pappas, and S. Sastry, Generation of Conflict Resolution Maneuvers for Air Traffic Management, Intelligent Robots and Systems, Grenoble, pp. 1598-1603, September 1997.

C. Tomlin and S. Sastry, Bounded Tracking for Non-Minimum Phase Nonlinear Systems with Fast Zero Dynamics, Proceedings of the 35th Conference on Decision and Control, New Orleans, pp. 2058-2063, December 1996.

C. Tomlin, G. Pappas, J. Lygeros, D. Godbole, S. Sastry, and G. Meyer, Hybrid Control in Air Traffic Management Systems, Proceedings of the 13th Congress of the International Federation of Automatic Control, San Francisco, pp. 127-132, July 1996.

C. Tomlin, J. Lygeros, L. Benvenuti and S. Sastry, Output Tracking for a Non-Minimum Phase Dynamic CTOL Aircraft Model, Proceedings of the 34th IEEE Conference on Decision and Control, New Orleans, pp. 1867-1872, December 1995.

*(Note: If you are interested in obtaining a pdf copy of any of the above papers, please contact Prof. Claire Tomlin.)*